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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs140421928 chr5:96203726 C/T 4.9E-10 485 15.17 20.43 20.6 KM Plot
THCA rs140423586 chr16:15178314 TAA/T 7.34E-6 481 16.6 14.2 17.77 KM Plot
THCA rs140441249 chr20:16645477 G/GACT 2.69E-6 470 16.07 16.37 12.8 KM Plot
THCA rs140446238 chr19:43573359 AAAGATGACATCAATAAATTG/A 0.000246 486 15.32 18.93 10.08 KM Plot
THCA rs140489463 chr1:119112196 G/T 3.64E-5 490 16.23 15.33 14.57 KM Plot
THCA rs140499542 chr1:91834298 C/T 7.73E-6 490 15.68 16.97 17.77 KM Plot
THCA rs1405004 chr7:64251134 G/A 6.15E-9 478 13.53 14.33 16.63 KM Plot
THCA rs1405005 chr7:64251182 T/C 5.76E-9 473 13.53 14.48 16.63 KM Plot
THCA rs1405007 chr7:64251473 A/G 5.14E-9 480 13.53 14.33 16.67 KM Plot
THCA rs140552234 chr6:119164713 C/T 0.000259 485 16.27 14.27 21.77 KM Plot
THCA rs140554015 chr2:196734117 G/GA 9.12E-5 469 15.67 16.07 19.47 KM Plot
THCA rs140575820 chr4:1083494 A/AT 2.64E-5 485 16.2 15.57 9.85 KM Plot
THCA rs140655802 chr16:20894311 CTTATCCCAAA/C 9.13E-5 490 16.33 14.75 17.65 KM Plot
THCA rs140667637 chr11:77956371 G/GA 2.4E-5 487 16.4 15.3 12.47 KM Plot
THCA rs140681818 chr16:69857501 G/T 0.000116 485 16.07 11.18 18.18 KM Plot